Ap Biology Unit 1 Flashcards
Matter
Anything that takes up space and has mass.
Element
Substance that cannot be broken down to other substances through chemical reactions. Each has a symbol. 92 occurring in nature.
Compound
Substance consisting of two or more different elements combined in a fixed ratio. *Characteristics different than those of its elements
CHON
4 elements essential to life
Trace Elements
Required by an organism only in minute quantities.
Atom
Smallest unit of matter that retains the properties of an element. Composed of subatomic particles. Mostly empty space.
Subatomic particles
Neutrons, protons, electrons. Make up atoms.
Proton
One unit of positive charge. Approximately one dalton. Located in nucleus.
Electron
One unit of negative charge. Located outside of nucleus.
Atomic Nucleus
Dense core packed with protons and neutrons.
Neutrons
Electrically neutral. Approximately one dalton.
Atomic Number
The number of protons (which is unique to that element) and written as a subscript to left of element symbol. Also tells us number of electrons since P=E if atom is neutral
Mass Number
Sum of the protons and the neutrons. An approximation of the atomic mass.
Isotopes
Same number of protons, but different number of neutrons and therefore different mass. Same element.
Radioactive Isotope
One in which the nucleus decays spontaneously, giving off particles and energy. Can decay to a different element. Have useful applications.
Energy
Capacity to cause change
Potential Energy
Energy matter possesses because of its location or structure. Electrons have this based on distance from nucleus.
Electron Shells
Where electrons are found, each with characteristic average distance and energy level. Electrons can change these by absorbing or losing energy.
Valence Electrons
Electrons in the outermost shell.
Chemical Bonds
The attraction that holds atoms together during an interaction.
Covalent Bond
Sharing of a pair of valence electrons by two atoms.
Molecule
Two or more atoms held together by covalent bonds.
Single Bond
One pair of shared electrons.
Structural Formula
H--H. Notation which represents both atoms and bonding.
Double Bond
Sharing two pairs of valence electrons.
Valence
Bonding capacity. Equal to the number of unpaired electrons required to complete the outermost (valence) shell.
Electronegativity
The attraction of a particular kind of atom for the electrons of a covalent bond.
Nonpolar Covalent Bond
Covalent bond in which electrons are shared equally.
Polar Covalent Bond
Where one atom is bonded to a more electronegative atom and the electrons of the bond are not shared equally.
Ionic Bonds
The attraction of cations and anions. The transfer of electrons creates ions which form an ionic bond.
Ion
A charged atom.
Cation
A positively charged atom.
Anion
A negatively charged atom.
Ionic Compounds
Or Salts. Compounds formed by ionic bonds.
Hydrogen Bond
When a hydrogen atom covalently bonded to an electronegative atom is also attracted to another electronegative atom.
van der Waals Interactions
Ever changing regions of positive and negative charge that enable all atoms and molecules to stick to one another.
Molecular Shape
Determines how biological molecules recognize and respond to one another.
Reactants
The starting materials of a chemical reaction.
Products
The resulting material of a chemical reaction.
Chemical Equilibrium
The point at which the relative concentrations of the products and the reactants stop changing and offset one another exactly.
organic chemistry
The study of carbon & hydrogen compounds (organic compounds).
carbon
this atom has 4 electrons in valence shell and can form 4 covalent bonds with other atoms
hydrocarbon
An organic molecule consisting only of carbon and hydrogen.
isomer
One of several compounds with the same molecular formula but different structures and therefore different properties. The three types are structural, geometric, and enantiomers.
structural isomer
One or several compounds that have the same molecular formula but differ in the covalent arrangement of their atoms. (DIFFERENT SHAPE)
geometric isomer
One of several compounds that have the same molecular formula and covalent bonds between atoms but differ in the spatial arrangements of their atoms owing to the inflexibility of double bonds (DIFFERENT ARRANGEMENT)
enantiomer
One or two compounds that are mirror images of each other and that differ in shape due to the presence of an asymmetric carbon. (MIRROR IMAGE)
estradiol
A steroid hormone that stimulates the development and maintenance of the female reproductive system and secondary sex characteristics; the major estrogen in mammals.
testosterone
Asteroid hormone required for development of the male reproductive system, spermatogenesis, and male secondary sex characteristics; the major androgen in mammals.
functional groups
A specific configuration of atoms commonly attached to the carbon skeletons of organic molecules and involved in chemical reactions.
hydroxyl group
A chemical group consisting of an oxygen atom joined to a hydrogen atom. Molecules possessing this group are soluble in water and are called alcohols.
ketone group
A chemical group consisting of a carbon double bonded to oxygen (must be in middle of chain)
ester group
A chemical group consisting of a carbon double bonded to oxygen and single bonded to another oxygen (must be in middler of chain)
aldehyde group
A chemical group consisting of a carbon double bonded to oxygen and single bonded to hydrogen (must be at end of chain)
carboxyl group
A chemical group consisting of a single carbon atom double-bonded to an oxygen atom and also bonded to a hydroxyl group
ionized carboxyl group
A chemical group consisting of a single carbon atom double-bonded to an oxygen atom and also bonded to a negatively charged oxygen
amino group
A chemical group consisting of a nitrogen atom bonded to two hydrogen atoms can act as a base in solution, accepting a hydrogen ion and acquiring a charge of 1âº
sulfhydryl group
A chemical group consisting of a sulfur atom bonded to a hydrogen atom.
phosphate group
A chemical group consisting of a phosphate atom bonded to four oxygen atoms; important in energy transfer.
Carbohydrates, proteins, lipids, and nucleic acids
Name the 4 types of macromolecules
Metabolism
All the chemical conversions that occur within a cellMetabolism = anabolism + catabolism
Catabolism
Conversion of complex organic molecules into smaller molecules by breaking chemical bonds
Anabolism
Conversion of small organic molecules by forming chemical bonds between smaller molecules
Hydrolysis
Pocess that is the reverse of dehydration synthesis. In __________, or water breakage, the bond between monomers is broken by the addition of a water molecule.
Dehydration synthesis
Reaction in which two molecules are covalently bonded, with the loss of a water molecule
Polymers
Long molecules consisting of many similar or identical building blocks linked by covalent bonds.
Glycosidic linkage
In carbohydrates, monosaccharides are joined together in a covalent bond called __________ _______.
Monosaccharides
Carbohydrates are made up of _______________.
Monosaccharide
The monomer in a carbohydrate is a(n) ______________.EX: Glucose
Disaccharide
Two monosaccharides covalently bonded form a ____________.EX: Sucrose
Polysaccharide
Three or more monosaccharides linked together form a ______________.
Glycosidic linkage
The bond in a carbohydrate is a(n) __________ _______.
Chitin; cellulose
Two examples of structural carbohydrates are ______ and _________.
Cellulose
Polymer of β glucose monomers that is found in plant cell walls
Glycogen; starch
Stored carbohydrate in an animal is called ________; in a plant, it is ______.
α glucose
Starch and glycogen are polymers of ________ molecules.
Polymers
Lipids are the only large biological molecules that do not form __________.
Lipids
Cushioning of organs, insulation, and energy storage are three functions of ___________.
Glycerol; fatty acid chains
Triglyceride is composed of a ______ and three ____ _____ ______.
Unsaturated fats
Fats with one or more double covalent bonds, which is less likely to solidify and more flexible.
Phospholipid
Basic structural component of cell membranes, with a polar/hydrophilic head region and a nonpolar/hydrophobic tail region, giving membranes their selective permeability.
Steroid
Lipid characterized by a carbon skeleton consisting of hydrogen-fused rings.
HDL
Good cholesterol is called ___ ____________.HINT: Keep your ____ HIGH :-)
LDL
The bad cholesterol, which can harden in arteries.HINT: Keep your ____ LOW :-)
Ester linkage
In a triglyceride, the ---OH of glycerol loses a H and the ---COOH of the fatty acid chain loses a ---OH which joins to form water in a(n) _____ _______.
Amino acid
The monomer in a protein is a(n) _____ ____.
Amino; carboxyl; R
Amino acids are formed of a(n) _____ group with a(n) ________ group and a(n) _ group side chain.
20
# different amino acids which can assemble according to genetic code to make different proteins.
Peptide
In a _______ bond, the ---COOH group in one amino acid loses an ---OH and the ---NH2 group in another amino acid loses a H.
Polypeptide
The polymer in a protein is a(n) ___________.
3D structure
The amino acid sequence ultimately determine the __ _________ of proteins.
Structure
A protein's _________ determines its function.
Primary
At the _______ level of protein structure, a linear sequence of amino acids is joined by peptide bonds to form a polypeptide.
Secondary
At the _________ level of protein structure, hydrogen bonds form between the partial positive hydrogen atom of amine groups and the partial negative oxygen atom of carboxyl groups.
β Pleated Sheet
__ ___________ ______________ are a secondary structure found in proteins.
α Helix
___ ___________ are a secondary structure found in proteins.
Tertiary
At the ________ level of protein structure, various chemical associations in precise regions of a polypeptide cause it to fold into a 3D shape that will determine its function.
Quaternary
At the __________ level of protein structure, 2 to 4 completely formed polypeptides combine.
Sickle cell anemia
In this disease, one amino acid at the primary level (valine) replaces glutamic acid and the result is a distorted shape at the subsequent levels.
Hormonal
Insulin and glucagon are examples of _________ proteins.
Receptor
________ proteins are embedded in all membranes and allow cells to interact with molecules and other cells.
Contractile/Movement
___________ proteins, such as actin and myosin, are found in muscle cells.
Transport
_____________ proteins move molecules into and out of cells.
Defensive
_________ proteins, like antibodies, are produced in response to antigens and bind to them.
Denaturation
Excessive heat can cause ____________, in which a protein unravels and loses its native shape.
Chaperonins
Assist in the proper folding of the protein by keeping the polypeptide segregated from disruptive chemical conditions in the cytoplasmic and create a hydrophilic environment for folding polypeptides
Nucleotides
Nucleic acids are composed of ___________.
Polynucleotide
The polymer in a nucleic acid is a(n) ______________.
Phosphodiester bonds
Nucleotides link together via ________ _____ to form nucleic acid.
Ribose
The sugar in RNA is ______.
deoxyribose
The sugar in DNA is ______.
A, T, C, G
The nitrogenous bases in DNA are ____.
A, U, C, G
The nitrogenous bases in RNA are ____.
Hydrogen
Nitrogenous bases in DNA and RNA form complementary base pairs by forming ____________ bonds.
sugars; phosphate groups
The backbone of DNA and RNA molecules is composed of alternating _____________ and ______________.
polar covalent
type of bond in water? Oxygen is more electronegative than hydrogen and the electrons of the polar bonds spend more time near oxygen thus, making oxygen more negativity charged and hydrogen more positively charged
Cohesion
holding a substance together
Adhesion
clinging of a substance to another
Capillary action
the attraction of the surface of a liquid to the surface of a solid, which causes the liquid to rise or fallCapillary action is the ability of a liquid to flow in narrow spaces without assistance. It occurs because of intermolecular forces between the liquid and surrounding solid surfaces. If the diameter of the tube is sufficiently small, then the combination of surface tension (which is caused by cohesion within the liquid) and adhesive forces between the liquid and container wall act to propel the liquid.When adhesion > cohesion, capillary action occurs.
Surface Tension
A measure of how difficult it is to break/stretch a surface
Kinetic Energy
energy of motion
Heat
total kinetic energy due to molecular motion
Calorie
amount of heat it takes to move 1 gram of substance 1 degree Celsius higher
Temperature
intensity of heat due to average kinetic energy
Specific heat
amount of heat needed to be absorbed /lost to change the temperature by 1 degree Celsiuswater has a high _____.
water
1 calorie/1 gram/I degree Celsius is the specific heat of ____.
Evaporative cooling
remains of a liquid cool down
vaporization
amount of heat needed to turn liquid into gas
evaporation
process of liquid becoming gas
How does the density of water contribute to aquatic life?
if ice sank, ponds/oceans/lakes would freeze solid, killing the life (during the summer only top would thaw) instead the floating ice insulates liquid water from below preventing it from freezing and killing animals
solution
liquid completely homogeneous of two or more substances
solvent
dissolving agent
solute
substance dissolved
aqueous solution
water is solvent
hydration shell
sphere of water molecules around dissolved ions
hydrophobic
water hating substances
hydrophilic
water loving substances
mole
the molecular weightof a substance expressed in grams (6.02 x 10^23)
molarity
concentration measured by number of mols/liter of solution
hydrogen ion
H+
hydroxide ion
OH-
hydronium ion
H30+
acids
increase H+ concentration
bases
reduce H+ concentration
pH scale
measures concentration of H+ (scale from 1-14)
buffers
substance that minimizes changes in H+/OH- concentration
acid precipitation
presence of sulfur oxides/nitrogen oxides and gaseous compounds react with air and goes into lakes, oceans, and soil, affecting animal life